Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKYYIVIGYLISMLITVAGVFFGLNHMLIETRGVYYILSVTIIACIVGGIVNLFLLSSVFTSLKKLKQKMKDISQRCFDTKAQICSPQEFKDLETAFNQMSSELESTFKSLNESEREKTMMIAQLSHDIKTPITSIQSTVEGILD--GIISEEEVNYYLNTISRQTNRLNHLVEEL-SFITLETMSDTAEPHKEETIYLDKLLIDILSEF------QLVFEKENRQVMIDVAPDVSKLSSQYDKLSRILLNLISNAVKYSDPGSPLT-IKAYSNRQD--IVIDIIDQGYGIKDEDLASIFNRLYRVESSRNMKTGGHGLGLYIARQLAHQLNGDILVESQYQKGSKFSLVLKLQK |
2C2A Chain:A ((7-241)) | ------------------------------------------------------------------------------------------------------SKELER----LKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFES-NVPCPVEAYIDPTRIR-------QVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD---------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69056 for 1404 contacts (-49.2/contact) +
2D Compatibility (PS) -22564 + (NN) -4773 + (LL) 10060
1D Compatibility (HY) -17200 + (ID) 3800
Total energy: -107333.0 ( -76.45 by residue)
QMean score : 0.435
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