Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKQKIAVLGPGSWGTALAQVLNDNGHEVRLWGNVVEQ--IEE----------INTSHTNQRYFKDITLDSKIKAYTNLEEAINNVDSILFVVPTKVTRLVAKQVANLLKHKVVIMHASKGLEPGTHERLSTILEEEISEQYRSDIVVVSGPSHAEEAIVRDITLITAASKDIGAAKYVQKLFSNHYFRLYTNTDVVGVETAGALKNIIAVGAGALHGLGYGDNAKAAIITRGLAEI---TRLGVQLGADPLTFSGLSGVGDLIVTGTSVHSRNWRAGDALGR-GEKLEDIEKNM--GMVIEGISTTKVAYEIAQNLNVY--MPITEAIYKSIYEGANIKDSILDMMSNEFRSENEWH |
| 2PLA Chain:A ((7-346)) | ----KVCIVGSGNWGSAVAKIIGNNVKKLQKFASTVKMWVFEETVNGRKLTDIINNDHENVKYLPGHKLPENVVAMSNLSEAVQDADLLVFVIPHQFIHRICDEITGRVPKKALGITLIKGIDEGP-EGLK-LISDIIREKMGIDISVLMGANIANEVAAEKFCETTIGSKVMENGLLFKELLQTPNFRITVVDDADTVELCGALKNIVAVGAGFCDGLRCGDNTKAAVIRLGLMEMIAFARIFCKGQVSTATFLESCGVADLIT--TCYGGRNRRVAEAFARTGKTIEELEKEMLNGQKLQGPQTSAEVYRILKQKGLLDKFPLFTAVYQICYESRPVQEMLSCLQS---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158513 for 2777 contacts (-57.1/contact) +
2D Compatibility (PS) -33696 + (NN) -2953 + (LL) 976
1D Compatibility (HY) -22000 + (ID) 5100
Total energy: -221286.0 ( -79.69 by residue)
QMean score : 0.468
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