Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYIEKIEANKVLDLKQIVPIEEEQMLSKTLVQRKDLGMTVFSLDKGQEIGRHSSPG-DAMVNILSGLAQITIDQDKFDVAAGECIVMPANIPHSLYAKEAFQMLLVVVKPEV
1V70 Chain:A ((5-100))
-------------DLKRLARYNPEKMAKIPVFQSERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGEEEALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAPR
General information:
TITO was launched using:
RESULT:
Template:
1V70.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77739 for 659 contacts (-118.0/contact) +
2D Compatibility (PS) -9992 + (NN) 2205 + (LL) 1448
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -89728.0 ( -136.16 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_1V70.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V70-query.scw
PDB file :
Tito_Scwrl_1V70.pdb
: