Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKTALNIPFTVEGIENYYQNIKMILSLADKWSIPKDDLLLFLKGLKAIDDIKVGSPIFKYFWTSLSLQAPLKALEFVLEQAKMPTELSGELSETQYLVAQFSDELAPHDDFWIALSQVIYDSFPGNSLAEDTVLNRKLHQFRYLISSQQAQYVRRYFKDVGMTDRDALVNYLSCLREPDNIAYYESARLHNKRRRNGEIFAFPDDEPVINSKLLISFHTEFIIDDKGNFLNEIDAEVITSNGIINGASFNYAFKNNTRHKELDVDPVKLDPKFRNDMTRGYRSPNLSRRKWFFFKEEDYDCSYFNKKGYYAFGRRSAKQSVDKQVKYLKKAVQKMRLN |
| 1SKN Chain:P ((25-38)) | ---SDNELPVSAFQISE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1982 for 48 contacts (-41.3/contact) +
2D Compatibility (PS) -1387 + (NN) -108 + (LL) 21992
1D Compatibility (HY) -400 + (ID) 100
Total energy: 18015.0 ( 375.31 by residue)
QMean score : 0.420
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