Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNSAANIRSFELALLFLLVFVAVYFVYLAVRDFKMSKNIRLLNWKVRDLIAGNYSDSILIQGDADLVELGESLNDLSDVFRMAHDNLEQEKNRLASILTYMTDGVLATDRSGKIVMINETAQQQFNLAYDEALSMNIVDMLGSGSPYSFQDLVSKTPEVVLNRRDENGEFVTLRIRFALNRRESGFISGLVAVSHDATEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALNEEVAPSFIKVSLD-ETNRMMRMISDLLSLSRIDNEVTHLDVEMTNFTAFMTSILNRFDQIRNQKTVTGKVYEIVRDYPLKSIWVEIDTDKMTQVIDNILNNAVKYSPDGGKITVNLRTTKTQMILSISDQGLGIPKKDLPLIFDRFYRVDKARSRQQGGTGLGLSIAKEIVKQHKGFIWAKSEYGKGSTFTIVLPYDKDAVTYEEWEDVED |
4BIX Chain:A ((61-296)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGASFNQVVTALERMMTSQQRLLSDISHELRTPLTRLQ-----LGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSR-NQQKNALVSETIKANQLWSEVL---DNAAFEAEQMGKSLTV--NFPPGPWPLYGNPNALESALENIVRNALRYSHT--KIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTD--------GTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKR------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75662 for 1606 contacts (-47.1/contact) +
2D Compatibility (PS) -24564 + (NN) -9966 + (LL) 16880
1D Compatibility (HY) -10800 + (ID) 3350
Total energy: -107462.0 ( -66.91 by residue)
QMean score : 0.418
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