Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEIAVLIIAIAFVVLVLGILFVLKKVSETIEETKQTIKVLTSDVNVTLYQ--TNEILAKANVLVDDVNGKV--STIDPLFVAIADLSESVSDLNLQARHIGQKASSATSSVTKAGSALAIGKAASKIFRKKGDKK |
2VSO Chain:E ((34-88)) | -------------------------------DEVERKMKSLLNKLTLEMFDAISSEILAIANISVWETNGETLKAVIEQIFLKACDEPHWSSMYAQLCGKVVKELNPDITDETKTGPKLVLHYLVARCHAEFDKGW |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VSO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2378 for 268 contacts (-8.9/contact) +
2D Compatibility (PS) -5249 + (NN) 494 + (LL) 4552
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -6931.0 ( -25.86 by residue)
QMean score : 0.339
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