Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSLHEVAKVVGAKNQVSEFEDVPLGNIEFDSRNISEGDLFLPLKGARDGHEFIEMAFDNGAIATISEKEIEGHPYLLVSDALK------------AFQVL--AQYYIEKMNV-DVIAVTGSNGKTTTKDMIAAI-----LSTTYKT---YKTQGNYNNEIGLPYTVLHMPEDTEKIILEMGQDHLGDIHVLSEIAKPRIAVVTLIGEAHLEFFGSREKIAEGKMQITDGMSSDGI-LIAPGDPIIDPYLPA---NQMTIRFGHDQELQVTELKE---EKHSLTFKTNALEHQLRIPVPGKYNATNAMVAAYVGKLLAVAEEDIVDALENLQLTRNRTEWKK---SANGADILSDVYNANPTAMRLILETFSAIPNNDGGKKIALLADMKELGEQSVDLHNQMIMSIRPDSIDTLI-----------CYGQDIEGLAQLASQMFPIGKVYFFKKNQEVDQFDQLLAKVKDTLKEKDQILLKGSNSMNLSKIVDILEVG |
| 1GQY Chain:A ((71-463)) | -------------------------------------------------------------------AEEHIEGASVVVVSSAIKDDNPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVNGGLVKSAGK-NAHLGASRYLIAEADESDASFLHL---------------QPMVSVVTNMEPD------DFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKVGRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGV---TIKAAREGWGDKRIVMIFQPHRY-SRTRDLFDDFVQVL--SQVDALIMLDVYAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQI-------IQDGDLILAQGAGSVSKISRGLAESWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78942 for 2697 contacts (-29.3/contact) +
2D Compatibility (PS) -36770 + (NN) -6700 + (LL) 6576
1D Compatibility (HY) -23600 + (ID) 4650
Total energy: -144086.0 ( -53.42 by residue)
QMean score : 0.321
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