Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLILKNRLKELRARDGINQTELAKLTGVSRQTISLIERGEYTPSVIIAMKVSQVFKESLENVFS----LVSTEE
1Y9Q Chain:A ((12-81))
----IANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSER
General information:
TITO was launched using:
RESULT:
Template:
1Y9Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14555 for 439 contacts (-33.2/contact) +
2D Compatibility (PS) -7271 + (NN) -1207 + (LL) 416
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -28217.0 ( -64.28 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_1Y9Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y9Q-query.scw
PDB file :
Tito_Scwrl_1Y9Q.pdb
: