Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIEVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
1BE4 Chain:A ((4-133))
-ERTFIAIKPDGVQRGLMGEIIKRFEQKGFRLVAMKFMRASEDLLKEHYIDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCI-----QVGRNIIHGSDSVESAEKEIALWFRP
General information:
TITO was launched using:
RESULT:
Template:
1BE4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77984 for 1027 contacts (-75.9/contact) +
2D Compatibility (PS) -13584 + (NN) -2903 + (LL) -36
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -111757.0 ( -108.82 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_1BE4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BE4-query.scw
PDB file :
Tito_Scwrl_1BE4.pdb
: