Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MK-QSNHRYHGPLIEFEIEYSYIKIFPWIGL-------FISCIGLYASNFGDPLGFIKFIFSVCIFVNLVSIIISLFLKKYLIF----------
1L7Y Chain:A ((1-94))
MSGGTAATTAGSKVTFKITLTSDPKLPFKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGVGVNPAQPAGNIFLKHGSELRLIPRDRVGH
General information:
TITO was launched using:
RESULT:
Template:
1L7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84580 for 459 contacts (-184.3/contact) +
2D Compatibility (PS) -7769 + (NN) 82 + (LL) 0
1D Compatibility (HY) 800 + (ID) 800
Total energy: -92267.0 ( -201.02 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_1L7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L7Y-query.scw
PDB file :
Tito_Scwrl_1L7Y.pdb
: