Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQIKLTPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQTDADIASQISG
4J10 Chain:A ((5-90))
-AEIKITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQAMQQYIPILEGISTDLKRIADKFRNTDN--------
General information:
TITO was launched using:
RESULT:
Template:
4J10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7892 for 484 contacts (-16.3/contact) +
2D Compatibility (PS) -9340 + (NN) -2097 + (LL) 892
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -23637.0 ( -48.84 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_4J10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J10-query.scw
PDB file :
Tito_Scwrl_4J10.pdb
: