Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLIKYILSFENIIAIFFIVLFGLLLIRIEPVNNSVYSIISGIAIDKVIIVIISSFVIAIFSAFFIIDILEIIFHLKIDSLFLIAYLFFAISLGFGLLKVLTESQFSLLSAFIAFPLFLIFPKLFEKIVNNRKINQKDNKNQK
3A0B Chain:T ((1-30))
-METITYVFIFACIIALFFFAIFFREPPRIT-----------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A0B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6976 for 106 contacts (-65.8/contact) +
2D Compatibility (PS) -3028 + (NN) 61 + (LL) 11012
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -2681.0 ( -25.29 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_3A0B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A0B-query.scw
PDB file :
Tito_Scwrl_3A0B.pdb
: