Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDLEKIIKAIKSDSQNQNYTE-NG----------------IDPLFAAPKTARINIVGQAPGLK-TQEARLYWKDK-SGDRLRQWL---GVDEE------------TFYHSGKFAVLPLDFYYPGKGKSGDLPPRKGFAEKWHPLILKEMPN---VQLTLLVGQYAQKYYLGSSA-HKNLT-ETVKSYKDY-LPD-YLPLVHPSPRNQIWLKKNPWFEKDLIVDLQKIVADILKD |
| 2D3Y Chain:A ((2-212)) | --DREAFVQTLTACRLCPRLVAWREEVVGRKRAFRGEPYWARPVPGFGDPEARILLFGLAPGAHGSNRTGRPFTGDASGAFLYPLLHEAGLSSKPESLPGDDLRLYGVYLTAAVRCAPP----------KN-KPTPEELRACARWTEVELGLLPEVRVYVALGRIALEALLAHFGLRKSAHPFRHGAHYPLPGGRHLLASYHVSRQNTQ-T------GRLTREMFLEVLMEAKRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14736 for 1328 contacts (-11.1/contact) +
2D Compatibility (PS) -17726 + (NN) -1911 + (LL) 644
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -38679.0 ( -29.13 by residue)
QMean score : 0.419
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