Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNRKDDHIKYA----LKYQSPYNSFDDIELIHSSLPKYNVNDIDLSTHFAGQSFEFPFYINAMTGGSEKGKAVNHKLAQVAQATGIVMATGSYSAALKNDE-DDSYPTT-DLYPDLKLATNIGLDK-----PLPAAESTVKAMNPIFLQVHVNVMQELLMPEGEREFHMWR-SHLKEYVDNIQCPLILKEVGFGMDLQSIKDAYDIGITTVDISGRGGTSFAYIE--------NQRGRDRSYLNTWGQTTAQSLINAQSMMDKMDILASGGIRHPLDMVKCLVLGAKAVGLSRTVLELVERYPVDDVIAILNSWKE---DLRMIMCALNCKKITDLRQVNYILYGQLKEANAK |
| 3B06 Chain:A ((4-349)) | IVNRKVEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALGADIAGMALPVL----KSAIEGKESLEQFFRKIIFELKAAMMLTGSKDVDALKKTSIVILGKLKEWAEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191797 for 2932 contacts (-65.4/contact) +
2D Compatibility (PS) -34738 + (NN) -10706 + (LL) 576
1D Compatibility (HY) -20000 + (ID) 4550
Total energy: -261215.0 ( -89.09 by residue)
QMean score : 0.453
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