Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKTIYDITIVGGGPVGLFAAFYAGLRGVSVKIIESLSELGGQPAILYPEKKIYDIPGYPVITGRELI---DKHIEQLERFKDSIEICLKEEVLSFEKVDDVFTIQTD-KDQHLSRAIVFACGNGAFAPRLLGLENEENYADNNLFY-NVTKLEQFAGKHVVICGGGDSAVDWANELDKIAASVAIVHRRDAFRAHEHSVDILKAS-GVRILTPYVPIGLNGDSQRVSSLVVQKVKGDEVIELPLDNLIVSFGFSTSNKNLRYWNLDYKRSS-INVSSLFETTQEGVYAIGDAANYPGKVELIATGYGEAPVAINQAINYIYPDRDNRVVHSTSLIK |
| 3F8R Chain:A ((16-319)) | -----FDVIIVGLGPAAYGAALYSARYMLKTLVIGETP--GGQ---LTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYE-----VPVLL-DIVEKIENR--EFVVKTKRKGEFKADSVILGIG---VKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238750 for 2571 contacts (-92.9/contact) +
2D Compatibility (PS) -31368 + (NN) -6849 + (LL) 1816
1D Compatibility (HY) -21200 + (ID) 4100
Total energy: -300451.0 ( -116.86 by residue)
QMean score : 0.378
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