Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYLTAGESHGPSLTAIIEGIPAGLKLSAKDINEDLKRRQGGYGRGNRMKIETDQVIISSGVRHGKTLGSPITLTVTNKDHSKWLDIMSVEDIEERLKQKRRIKHPRPGHADLVGGIKYRFDDLRNALERSSARETTMRVAIGAIAKRILKEIGIEIANHIVVFGGKEITVPDKLTVQQIKV-LSSQSQVAIVNPSFEQEIKDYIDSVKKAGDTIGGVIETIVGGVPVGLGSYVHWDRKLDAKIAQAVVSINAFKGVEFGLGFKSGFLKGSQVMDSISWTKDQGYIRQSNNLGGFEGGMTNGEPIIVRGVMKPIPTLYKPLMSVDIDTHEPYRATVERSDPTALPAAGVVMEAVVATVLVTEVLEKFSSDNMYELKEAVKLYRNYVNHF |
| 1SQ1 Chain:A ((8-360)) | LKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELDKRKG------------DKAQVLSGVFEGYTTGHPIAIVVF------------------------------------------------------SARESVARVAGGAVAAMLLREFDICVQSGVFGVG----TFVSNLKEEEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGMLIGLGE-VLYD-KLDSKLAHALMGINAVKAVEIGEGINASKMRGSCNNDAL---KDGKFL--SNHSGGILGGISNGENLILKTYFKPTP---------------------GRHDPCVGVRGSVVASAMVRLVLADCLLLN-ASANLNNLKNAYG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155612 for 2332 contacts (-66.7/contact) +
2D Compatibility (PS) -30864 + (NN) -17375 + (LL) 6616
1D Compatibility (HY) -21200 + (ID) 5150
Total energy: -223585.0 ( -95.88 by residue)
QMean score : 0.557
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