Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDYINRILHFIKEHMTYHVNFIDDFLDIKWEKVSNIHLRFWTTIIAYLVIFILSISTVILNLVLLFQGFLTQNPIIYLLFFITLVCAFYFAYKFITYTPTIVKNALQYIKKLKNV
2LFH Chain:A ((52-67))
---------------------------------------------------------------------------------------------------VEILQRVIDYILDLQVV
General information:
TITO was launched using:
RESULT:
Template:
2LFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1000 for 53 contacts (18.9/contact) +
2D Compatibility (PS) -1742 + (NN) -1470 + (LL) 10608
1D Compatibility (HY) -2400 + (ID) 200
Total energy: 5796.0 ( 109.36 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_2LFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LFH-query.scw
PDB file :
Tito_Scwrl_2LFH.pdb
: