Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRCPKCGYNKSSVVDSRQAEEGTTIRRRRECEKCGNRFTTFERLEELPLLVIKKDGTREQFSRDKILNGIIQSAQKRPVSSEDIENCILRIERKIRSEYEDEVSSITIGNLVMDELAELDEITYVRFASVYKSFKDVDEIEELLQQITKRVRSKKSGSV
2XAP Chain:A ((4-66))
-----------------------------------------------NLLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYD----GIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKM
General information:
TITO was launched using:
RESULT:
Template:
2XAP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28138 for 359 contacts (-78.4/contact) +
2D Compatibility (PS) -6597 + (NN) -928 + (LL) 3112
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -35301.0 ( -98.33 by residue)
QMean score : 0.690
(partial model without unconserved sides chains):
PDB file :
Tito_2XAP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XAP-query.scw
PDB file :
Tito_Scwrl_2XAP.pdb
: