Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSLNGETLLTGLIANPARHSLSPLMWNTSFQEKNMNYAYLTFEVEEGKLTEAVRGVRALGIRGVNVSMPFKQSVIPLLDDLSPQAKLVGAVNTIVNQGGTGRLVGHMTDGIGCFKALAAQGFSAKNKIVTIAGIGGSGKAVAVQAAMEGVAEIRLFNRNSSNYDKVIDLSDKIKKQFQIKVVVDYLENKTAFKDAIRTSHFYIDATSLGMRPLDNYSLINDPEILTPNLVVVDLVYKPKETALLRFVRQNGVKHAYNGLGMLIYQGAEAFQLITNQEMPISSVERVLQTEN |
| 3DOO Chain:A ((4-261)) | -----------AVIGNPISHSLSPLMHHANFQSLNLENTYEAINVPVNQFQDIKKIISEKSIDGFNVTIPHKERIIPYLDDINEQAKSVGAVNTVLVK--DGKWIGYNTDGIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFN---NWSLNIN-----KINLSHAESHLDEFDII------INTTP-----------VISLNRLASHTLVSDIVYNPYKTPILIEAEQRG-NPIYNGLDMFVHQGAESFKIWTNLEPDIKAMKNIVIQKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DOO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124474 for 2082 contacts (-59.8/contact) +
2D Compatibility (PS) -26543 + (NN) -7534 + (LL) 2356
1D Compatibility (HY) -16000 + (ID) 4200
Total energy: -176395.0 ( -84.72 by residue)
QMean score : 0.548
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