Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTTKVFSVLSLSVAAFMMTACQSNHSTKKADMSPDKVEQKTKFKNISLSSNKLLAKENTMSVLWYQNSAEAKALYLQGYNVAKMKLDDWLQKPSEKPYSIILDLDETVLDNSPYQAKNIKDGSSFTPESWDKWVQKKSAKAVAGAKAFLK-YAN--EKGIKIYYVSDRTDAQVDATKENLEKEGIPVQGKDHLLFLKKGMKSKE------SRRQAVQKDTNLIMLFGDNLVDFADFSKSSSTDREQLLTKLQSEFGSKFIVFPNPMYGSWESAIYQGKHLDVQKQLKERQKMLHSYD |
| 4FYP Chain:A ((107-237)) | -----------------------------------------------------------------------------------------------------IFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLE--SGESTPGLPETLHLYENLLELGIEPIIISDRWKKLSEVTVENLKAVG--VTKWKHLILKPNGSKLTQVVYKSKVRNSLVKKGYNIVGNIGDQWADLVEDTPGRVFKLPNPLYYVPSLEHHHH-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4675 for 805 contacts (-5.8/contact) +
2D Compatibility (PS) -13301 + (NN) -8590 + (LL) 9776
1D Compatibility (HY) -6000 + (ID) 2000
Total energy: -24790.0 ( -30.80 by residue)
QMean score : 0.425
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