Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTNKIAPSILAADYANFANELKRIEETTAEYVHIDIMDGQFVPNISFGADVVSSMRKH--SKLVFDCHLMVVDPERYIEDFAQAGADIMTIHVEATKHIHGALQKIKEAGMKAGVVINPGTPVESLIPILDLVDQILIMTVNPGFGGQAFIPEMMSKVKTVAAWRKEYGHHYDIEVDGGIDNTTIKAAAEAGANVFVAGSYLFKASDLPAQVETLRVALDD
3QC3 Chain:A ((4-215))
-SGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVH----WLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSE
General information:
TITO was launched using:
RESULT:
Template:
3QC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163308 for 1765 contacts (-92.5/contact) +
2D Compatibility (PS) -23046 + (NN) -11156 + (LL) 740
1D Compatibility (HY) -20400 + (ID) 4900
Total energy: -222070.0 ( -125.82 by residue)
QMean score : 0.699
(partial model without unconserved sides chains):
PDB file :
Tito_3QC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QC3-query.scw
PDB file :
Tito_Scwrl_3QC3.pdb
: