Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRIRKSLIFVLGVVTLICLCACTKQSQQKNGLSVVTSFYPVYSITKAVSGDLNDI-KMIRSQSGIHGFEPSSSDVAAIYDADLFLYHSHTLEAWARRLEPSLHHSKVS-----VIEASKGMTLDKVHGLEDVEAEKGVDESTLYDPHTWNDPVKVSEEAQLIATQLAKKDPKNAKVYQKNADQFSDKAMAIAEKYKPKFK--AAKSKYFVTSHTAFSYLAKRYGLTQLGIAGVSTEQEPSAKKLAEIQEFVKTYKVKTIFVEEGVSPKLAQAVASATRVKIASLSPLEAVPKNNKD---YLENLETNLKVLVKSLNQ |
4OXR Chain:A ((9-284)) | --------------------------------LKIVTTNSILYDMTKNITGDKAEIHSIVPVGQDPHEYEIKPKDVQALTDADVIIYNGFNLESGNGWFEKALKQANKSIKDDSVIQASKN--------VKPIYLKQGEKSEHNIDPHAWLSLGNGIEYVKTIKSALENADKTHAKDYDKQGTEYLSKLEKLNKESKDKFNDIPKEKRVMITSEGAFKYFAQQFDVKPGYIWEINTENQGTPEQMKQAVDFVKENHIKNLLLETSVSDKSMKSLGEETGAKIYGTVYTDSIGKKGSDGDSYYKMMESNIKTIHESMQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86170 for 2205 contacts (-39.1/contact) +
2D Compatibility (PS) -28554 + (NN) -10552 + (LL) 3392
1D Compatibility (HY) -14000 + (ID) 3600
Total energy: -139484.0 ( -63.26 by residue)
QMean score : 0.490
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