Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFINNYTLKIGNRILLENTNLDFEEGEINHLLGRNGSGKSQL------------AKDFI----INRGNYFSNDIYEDTLIISSYSNLPSDVTINDLERTIPWK---LSKEIYQLLNINQISKTVKLKQ-------LSDGQKQKVKLLVLLSLDKHIIILDEITNALDKKSVDEI-NVFLQNYIQYYPEKIIINISHDINNIRSLKGNYFLIDNQKICKVDTLDDAISWYLGE |
| 4YMU Chain:J ((2-222)) | IFVNDVYKNFGSLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKINNGKVNINKVRQKVGMVFQHFNLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLLAKVGLLDKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANEGM---TMVVVTHEMGFAREVGDRVIFMDDGVIVEEGTPEEIFYRAKNE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -66921 for 1462 contacts (-45.8/contact) +
2D Compatibility (PS) -20511 + (NN) -4994 + (LL) 28
1D Compatibility (HY) -11600 + (ID) 2600
Total energy: -106598.0 ( -72.91 by residue)
QMean score : 0.291
|
|
|