Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEIKEYENNPYHLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLRI--DDKTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDE------LDVDYIFPDRDSRIYVKLLD
1MK4 Chain:A ((1-156))--MDIRTITSSDYEMVTSVLNEWWGGRQ----LKEKLP--RLFFEHFQ---DTSFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFRKM--QIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKGTKTVNGISVFANYDGPGQDRVLFVKNI-


General information:
TITO was launched using:
RESULT:

Template: 1MK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57576 for 1050 contacts (-54.8/contact) +
2D Compatibility (PS) -15267 + (NN) -1402 + (LL) 868
1D Compatibility (HY) -2400 + (ID) 1250
Total energy: -77027.0 ( -73.36 by residue)
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_1MK4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MK4-query.scw
PDB file : Tito_Scwrl_1MK4.pdb: