Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTAPFIAIEGPIGAGKTTLATMLSQ-KFGFPMINEIV--------EDNPYLDKFYDNIKEWSFQLEMFFLCHRYK--------QLEDTSDHFLKKGQPVIADYHIYKNVIFAERTLSPHQLEKYKKIYHLLTDDLPKP---NFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLISDYEV-----AIKQLQEADPELTVLTVDGDSKDFVLNKSDFERIAAHVKELIV
2ZI4 Chain:A ((43-276))
------ISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVQSNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVN-EDF---KDKYESLVEKVKEFL-
General information:
TITO was launched using:
RESULT:
Template:
2ZI4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88401 for 1404 contacts (-63.0/contact) +
2D Compatibility (PS) -20767 + (NN) -9580 + (LL) 768
1D Compatibility (HY) -17600 + (ID) 2800
Total energy: -138380.0 ( -98.56 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_2ZI4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZI4-query.scw
PDB file :
Tito_Scwrl_2ZI4.pdb
: