Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MEPIFIIGIILG-----LVILLFLSGSAAK----PLKWIGITAVKFVAGALLLVCVNMFGGSLGIHVPINLVTTAISGILGIPGIAALVVIKQFII
4U3Q Chain:A ((10-130))
KAKAEKVECALKGGIFRGTLPIDTTVTFNADGTAQKVELSPLTYRG-TWMVREDGIVELSLVE-----KELYELIDSNSVRYMGAPG-AEMAPFYVLKKT--
General information:
TITO was launched using:
RESULT:
Template:
4U3Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79305 for 513 contacts (-154.6/contact) +
2D Compatibility (PS) -8185 + (NN) 4157 + (LL) 784
1D Compatibility (HY) 0 + (ID) 1000
Total energy: -83549.0 ( -162.86 by residue)
QMean score : 0.263
(partial model without unconserved sides chains):
PDB file :
Tito_4U3Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U3Q-query.scw
PDB file :
Tito_Scwrl_4U3Q.pdb
: