Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MTLTTQFYTMLAMSGMGLWLGASLDTYRLFVIRAKTARWLLFIHDILFWIMQGLLFFYVLLHVNEGEFRIYIFLAVLLGVATYQSLCKRIYIKILKFVIYLVVSVYQFFKK-----LIQHVLFRPI----VWTCGA------------IIWLAAFLFKKTYSLIGFLLLCLYKIVMVLCFPIRFIAKQCLKLLPVKMRLTFRRYFEKGAGFLKKKKKLLITIRTTITRFLKR
1YAR Chain:O ((10-237))KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGVIRNST------------YGRAQAEKSP------EQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEEDNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLI-QPRTGSDHMVS-


General information:
TITO was launched using:
RESULT:

Template: 1YAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158249 for 1290 contacts (-122.7/contact) +
2D Compatibility (PS) -19824 + (NN) -6543 + (LL) 2812
1D Compatibility (HY) -1200 + (ID) 1550
Total energy: -184554.0 ( -143.07 by residue)
QMean score : 0.309

(partial model without unconserved sides chains):
PDB file : Tito_1YAR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YAR-query.scw
PDB file : Tito_Scwrl_1YAR.pdb: