Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSVKDFLNKHNLTLKGATIIVGVSGGPDSMALLHALHTLCGR-SANVIAAHVDHRFRGAESEEDMRFVQAYCKAEQLVCETAQINVTAYAQEKGLNKQAAARDCRYQFFEEIMSKHQADYLALAHHGDDQVETMLMKLAKGTLGTGLAGMQPVRRFGTGRIIRPFLTITKEEILHYCHENGLSYRTDESNAKDDYTRNRFRKTVLPFLKQESPDVHKRFQKVSEALTEDEQFLQSLTKDEMN-KVITSQSNTSVEINSSQLLALPMPLQRRGVQLILNYLY-E-N-VPSSFSAHHIQQFLDWAENGGPSGVLDFPKGLKVVKSYQTCLFTFEQWQCKNVPF--EYQISGAADETAVLPNGYLIE--AR-HY-ADSPEEHGNAVFITSEKKVRFPLTIRTRKAGDRIKLKGMNGSKKVKDIFIDKKLPLQERDNWPIVTDASGEIIWIPGLKKSIFEDLVIPNSDRI--VLQYRQHEKCRGQAKS |
| 3A2K Chain:A ((3-460)) | -DKVRAFIHRHQLLSEGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQIDVPAFQRSAGLGAQEAARICRYRFFAELMEKHQAGYVAVGHHGDDQVETILMRLVRGSTSKGYAGIPVKRPFHGGYLIRPFLAVSRAEIEAYCRQMGLSPRCDPSNEKDDYTRNRFRHHIVPLLRQENPRLHERFQQYSEMMAEDEQFLEELAADALNKVMEKQH--RDAALSIGPFLELPRPLQRRVLQLL---LLRLYGGVPPTLTSVHIGHILMLCERGRPSGMIDLPKGLKVIRSYDRCLFTFDAESGE-KGYWFELPVP---AL-LPLPNGYAIISEFGEHYPRKQAG--NDWFVVDP-ASVSLPLRVRTRRRGDRMVLKGTGGTKKLKEIFIEAKIPRMERDRWPIVEDADGRILWVPGLKKSAF--EAQNRGQARYILLQYQ----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172157 for 3273 contacts (-52.6/contact) +
2D Compatibility (PS) -48641 + (NN) -20824 + (LL) 1272
1D Compatibility (HY) -43600 + (ID) 10950
Total energy: -294900.0 ( -90.10 by residue)
QMean score : 0.497
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