Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYETDPVGYEDQAQFLNMAVEIKTSLNPFELLELTQQIENELGRTREV-RWGPRTADLDILLFNRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVDEFVHSES
4M5M Chain:A ((6-139))
---VAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPEL-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4M5M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99779 for 1009 contacts (-98.9/contact) +
2D Compatibility (PS) -13674 + (NN) -2878 + (LL) 2088
1D Compatibility (HY) -9600 + (ID) 3200
Total energy: -127043.0 ( -125.91 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_4M5M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M5M-query.scw
PDB file :
Tito_Scwrl_4M5M.pdb
: