Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHFQQLLSDYPFQTSIELVAGGDERQHSVYKGLKAVKQEKIVLVHDGARPFIKHEQIDELIAEAEQTGAAILAVPVKDTIKRVQDLQVSETIERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMEGGSVRVVEGSYTNIKLTTPDDLTSAEAIMESESGNKHV
2PX7 Chain:A ((1-207))
MEVSVLIPAAG-------G-PKAFLQVGGRTLLEWTLAAF---RDAAEVLVALPPG---------AEPPKGLGAVFLEGGATRQASVARLLEAASL-PLVLVHDVARPFVSRGLVARVLEAAQRSGAAVPVLPVPDTLMAPEGEAYGRVVPREAFRLVQTPQGFFTALLREAHAYARRKGLEASDDAQLVQAL-GYPVALVEGEATAFKITHPQDLVLAEAL----------
General information:
TITO was launched using:
RESULT:
Template:
2PX7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110169 for 1616 contacts (-68.2/contact) +
2D Compatibility (PS) -22144 + (NN) -10838 + (LL) 2260
1D Compatibility (HY) -13200 + (ID) 3800
Total energy: -157891.0 ( -97.70 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_2PX7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PX7-query.scw
PDB file :
Tito_Scwrl_2PX7.pdb
: