Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRKGPVAKRDVLPDPIYNSKLVSRLINKMMIDGKKGKSQTILYKSFDIIKERTGNDAMEVFEQALKNIMPVLEVKARRVGGANYQVPVEVRPERRTTLGLRWLVNYARLRGEKTMEERLANEILDAANNTGAAVKKREDTHKMAEANKAFAHYRW
1IBL Chain:G ((2-156))
-ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAYAHYRW
General information:
TITO was launched using:
RESULT:
Template:
1IBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28752 for 1118 contacts (-25.7/contact) +
2D Compatibility (PS) -17144 + (NN) -10431 + (LL) 208
1D Compatibility (HY) -12800 + (ID) 3900
Total energy: -72819.0 ( -65.13 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_1IBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IBL-query.scw
PDB file :
Tito_Scwrl_1IBL.pdb
: