Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVKQATPGGVVKKGEVVKAVIVRTKSGARRSDGSYISFDENACVIIRDD-KSPRGTRIFGPVARELRENNFMKIVSLAPEVI
3J7Z Chain:K ((1-122))
MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEV-
General information:
TITO was launched using:
RESULT:
Template:
3J7Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63354 for 944 contacts (-67.1/contact) +
2D Compatibility (PS) -13079 + (NN) -5414 + (LL) 204
1D Compatibility (HY) -14000 + (ID) 3950
Total energy: -99593.0 ( -105.50 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_3J7Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7Z-query.scw
PDB file :
Tito_Scwrl_3J7Z.pdb
: