Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRIDPSKLELEERLVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIRKAVEDAKKNLIEVPMVGTTIPHEIIGRFGAGNILLKPASEGTGVIAGGPVRAVLELAGVADILSKSLGSNTPINMIRATLQGLSELKRAEDVAKLRGKSVEELLG
4X65 Chain:E ((5-152))
---------DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNGTIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLR---------
General information:
TITO was launched using:
RESULT:
Template:
4X65.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72897 for 1157 contacts (-63.0/contact) +
2D Compatibility (PS) -16066 + (NN) -5921 + (LL) 1052
1D Compatibility (HY) -13600 + (ID) 4150
Total energy: -111582.0 ( -96.44 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_4X65.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X65-query.scw
PDB file :
Tito_Scwrl_4X65.pdb
: