Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLHELKPSEGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPKRGFTNINRKEYAVVNLDKLNGFAEGTEVTPELLLETGVISKLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI
5ADY Chain:L ((2-143))
-RLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEIRLSDLAKV-EGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIE--
General information:
TITO was launched using:
RESULT:
Template:
5ADY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2738 for 800 contacts (-3.4/contact) +
2D Compatibility (PS) -15542 + (NN) -7143 + (LL) 748
1D Compatibility (HY) -7600 + (ID) 3350
Total energy: -35625.0 ( -44.53 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_5ADY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5ADY-query.scw
PDB file :
Tito_Scwrl_5ADY.pdb
: