Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKDDVIEVEGTIVETLPNAMFKVELENGHTVLAHVSGKIRMHFIRILPGDKVTVELSPYD-LTRGRITYRYK
1JT8 Chain:A ((17-85))
---KEENEILGIIEQMLGASRVRVRCLDGKTRLGRIPGRLKN-RIWVREGDVVIVKPWEVQGDQKCDIIWRYT
General information:
TITO was launched using:
RESULT:
Template:
1JT8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32319 for 451 contacts (-71.7/contact) +
2D Compatibility (PS) -7350 + (NN) -1425 + (LL) 460
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -44284.0 ( -98.19 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_1JT8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JT8-query.scw
PDB file :
Tito_Scwrl_1JT8.pdb
: