Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVRPSVKPICEKCKVIRRKGKVMVICENPKHKQKQG
1RKI Chain:A ((78-96))
--------PNCDKCLIVEIGGVYFVRR----------
General information:
TITO was launched using:
RESULT:
Template:
1RKI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7899 for 72 contacts (-109.7/contact) +
2D Compatibility (PS) -2184 + (NN) -30 + (LL) 840
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -11173.0 ( -155.18 by residue)
QMean score : 0.815
(partial model without unconserved sides chains):
PDB file :
Tito_1RKI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RKI-query.scw
PDB file :
Tito_Scwrl_1RKI.pdb
: