Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTPFERLALYDINASIKEGSYVAVIGHTGSGKSTLLQHLNGLLKPTKGQISLGSTVIQAGKKNKDLKKLRKKVGIVFQFPEHQLFEETVLKDISFGPMNFGVKKEDAEQKAREMLQLVGLS-EELLDRSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPRGRKEIMDMFYELHQRGNLTTILVTHSMEDAAAYADEMIVMHKGTIQASGSPRDLFLKGEEMAGWGLDLPETIKFQRHLEAALGVRFNEPMLTIEDAAAEIRALFQGEKTL |
4ZIR Chain:A ((17-222)) | --TPLEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGD------VLYDGE--KGYE-IRRNIGIAFQYPEDQFFAERVFDEVAFAVKNF-YPDRDPVPLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGK-TVILISHDIETVINHVDRVVVLEKGKKVFDGT------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98687 for 1557 contacts (-63.4/contact) +
2D Compatibility (PS) -22253 + (NN) -12832 + (LL) 5300
1D Compatibility (HY) -18000 + (ID) 4100
Total energy: -150572.0 ( -96.71 by residue)
QMean score : 0.493
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