Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQVQYYGTGRRKSSVARVRLVPGEGRIVVNNREISEHIPSAALIEDIKQPLTLTETAGTYDVLVNVHGGGLSGQAGAIRHGIARALLEADPEYRTTLKRAGLLTRDARMKERKKYGLKGARRAPQFSKR
1I94 Chain:I ((3-128))
----QYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR
General information:
TITO was launched using:
RESULT:
Template:
1I94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52289 for 915 contacts (-57.1/contact) +
2D Compatibility (PS) -13332 + (NN) -4357 + (LL) 664
1D Compatibility (HY) -6400 + (ID) 3300
Total energy: -79014.0 ( -86.35 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_1I94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I94-query.scw
PDB file :
Tito_Scwrl_1I94.pdb
: