Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFEDIPFLQYLGNAVDILLVWYVIYKLIMVIRGTKAVQLLKGIVVIVLVRMASQYLGLSTLQWLMDQAITWGFLAIIIIFQPELRRALEQLGRGRFFSRSGTPVEEAQQKTIEAITKAINYMAKRRIGALLTIERD-TGMGDYIETGIPLNAKVSSELLINIFIPNTPLHDGAVIMKNNEIAAAACYLPLSESPFI-SKELGTRHRAAVGISEVTDSLTIIVSEETGGVSVAKNGDLHRELTEEALKEMLEAEFKKNTRDTSSNRWYWRGKKNG |
| 4YXM Chain:A ((44-155)) | -------------------------------------------------------------------------------------------------------------------LRKALDDIINANFGALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYELSKMN-----GAIVLSEDITKIYYANVHLVPDPTIPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISL------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YXM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -83139 for 823 contacts (-101.0/contact) +
2D Compatibility (PS) -11730 + (NN) -3212 + (LL) 14348
1D Compatibility (HY) -6400 + (ID) 1550
Total energy: -91683.0 ( -111.40 by residue)
QMean score : 0.560
|
|
|