Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLNRQFIRTQLIAQNILSKNAPAKRENATENPAAVLEKAYSRLKSQSSTGGINQFNYSKTSVSGNSGTFSKVYQSANDRTVTDTGEETVIQSQNPYESESDIRIKILDEKYSRMNAINKTKSDPLGYIKDKYQNSKSPYFRSDLSAAERQAAYDNETEWLFKGKAQNYNLQDAVFRNVTFHGEVEAENEKVYQRGQVNQQLQVLLNRNHIHIPEGTELTFTITPIDYQVRVSGTDDQDLIKQIEQVLQSGDNSKELFLHIMKSQSSDSAQFSEEAYKKYQAAREMYEVTGYHLKDLEVIDGRYVTPEGRDLMDVYKEELEKDPVQKQTASYAISYYRSELSKIAEAGYNAIPDFILSIDYSNGSLRDVGQSKSYGTGDTGWLEALKRQTGVNY |
| 2KO1 Chain:A ((16-57)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NGMTNQITGVISKFDTNIRTIVLNAKD-GIFTCNLMIFVKNTD------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KO1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -5464 for 187 contacts (-29.2/contact) +
2D Compatibility (PS) -4541 + (NN) -4225 + (LL) 21700
1D Compatibility (HY) -2000 + (ID) 100
Total energy: 5370.0 ( 28.72 by residue)
QMean score : 0.458
|
|
|