Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDVTLGYLRESLSNHLENEVCQRICKKMLAKRYANEEEFVKDLDDNEMSFLNHV--LEKEIKYAQNEQDQKRAKELNEVYELLL
4F52 Chain:A ((34-114))
LEDTLNQVMEKFKK--DKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFK---
General information:
TITO was launched using:
RESULT:
Template:
4F52.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13096 for 413 contacts (31.7/contact) +
2D Compatibility (PS) -8154 + (NN) -3062 + (LL) 748
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -1672.0 ( -4.05 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_4F52.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F52-query.scw
PDB file :
Tito_Scwrl_4F52.pdb
: