Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKRMIVRMTLPLLIVCLAFSSFSASARAA-------SEEKYWDHWIERHAQPLDASNASNKDLRFLK--KVLKGKRIVQLGETTHGAGEINATKVRMIKYLHEELGYDVLAFESGFPDTNASYLNMDQLTPKSTMKNSIYAVWHTEDVVELFDYMKEQKEKGDPLILTGFDIQSMKNSFNVAATQWVKAVDPEKAELLSQSENDFSTLVTDSNTFDEFSQKKEKLVKNYQKLIKFTKTHASELKENLPKEPKAYEMFMHSLQLRIDVMETYMLEEMKEKLEEYPENIEDFSFFMRDRMMAEQFQWVADTLYPKKKIIVWGHNYHLRKQNTKMIKDWVQLNGPNMGDYLPERLKKQTYTIGIYAYSGASLDSSDNKTVKPVTSPPPSGSLEALLKAADRPAVFVDFLHTKNKKGTSWMYTPRTALYWGYMEEQMILKEQYDGVIWLEHITPSVIIK
3MS5 Chain:A ((96-280))--------------------CFSKQARAKLQRELFFPECQYWGS--ELQLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGEVSKLGKRM-GFLYLTFYGHTWQVQDKIDANNVAY------TTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNV-----------CQKLKKNNPQAFQILSSTFVDFTDIGVDYCDFS--VQSKHKIIE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3MS5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 535 -14779 -27.62 -83.97
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -27.62
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.094

(partial model without unconserved sides chains):
PDB file : Tito_3MS5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MS5-query.scw
PDB file : Tito_Scwrl_3MS5.pdb: