Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWEQLYDPFGNEYVSALVALTPILFFLLALTVLKMKGILAAFLTLAVSFFVSVWAFHMPVEKAISSVLLGIGSGLWPIGYIVLMAVWLYKIAVKTGKFTIIRSSIAGISPDQRLQLLLIGFCFNAFLEGAAGFGVPIAISAALLVELGFKPLKAAALCLIANAASGAFGAIGIPVITGAQIGDLSALELSRTLMWTLPMISFLIPFLLVFLLDRMKGIKQTWPALLVVSGGYTAVQTLTMAVLGPELANILAALFSMGGLALFLRKWQPKEIYREEGAGDAGEKKAYRAADIAKAWSPFYILTAAITIWSLPAFKALFQEGGLLYQSTLLFKMPFLHQQIMKMPPIAPSAMPLDAVFKVDLLSATGTAILAAVIVTGLFSKKFSSRDAFASLKETGKELWVPIMTICFVMGFANLANFAGLSSSIGLALAK-TGDLFPFVSPVL-GWIGVFITGSVVSNNALFGHLQVVTGAQIGAGSDLLLAANTAGGVMAKLVSPQSIAIAAAAVGQTGKESKLFKRTVAYSLILLLIICIWTFILARLGV
4R0C Chain:A ((70-175))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FTTLVGNFTGFAPLG-VVLVAMLGLGVAEQSGLLSVSLASLVRRSSGGALVFTVAFAGVLSSLT---VDAGYVVLIPLAGLVFQLAGRPPIAGIATAFAAVSGGFSANLL---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 313 -35601 -113.74 -342.32
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.42

3D Compatibility (PKB) : -113.74
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.42
QMean score : 0.123

(partial model without unconserved sides chains):
PDB file : Tito_4R0C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R0C-query.scw
PDB file : Tito_Scwrl_4R0C.pdb: