Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIHQHPESFPKHFLWGSASAAYQIEGAWNEDGKGPSVWDVFT--------KIPGKTFKGT---NGEIAVDHYHRFKEDVALMAEMGLKAYRFSVSWPRVFPKG-KGEINEAGLAFYDSLIDELLSHHIEPVLTLYHWDLPQALMDEYGGFESRNIIEDFNHYCITLYKRFGDRVKYWVTLNEQN--YNFNHGFITAMHPPGV----KDRKRF-YEANHIAFLANAKAIESFREYVPEGKIGPSFAYSPAYPLSSHPEDILAFENAEEFTNNWWLDMYCWGTYPQIPFRCLEKQGWAPTIEAGDMDLLAKGKPDFVGVNYYQTITYERNPLDGVSEGKMNTTGQKGTNQETGIPGVFKTKKNPHLTTSNWDWTIDPIGLRIGLRRITSRYQLPVFITENGLGEFDKVE-DGTVQDDYRIDYLRSHLEQCRQAI-SDGVDLIGYCSWSFTDLLSWLNG-YQKRYGFVYVNRDEESTSDLKRLKKKSFYWYQDVIKTNGESL
3PN8 Chain:A ((7-480))--------LPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPNHE-AIDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQANYQEDFAPFTNSGIVYKEGDDREAIMYQAAHYELVASARAVKIGHAINPNLNIGCMVAMCPIYPATCNPKDILMAQKAMQ-KRYYFADVHVHGFYPEHIFKYWERKAIKVDFTERDKKDLFEGTVDYIGFSYYMSFVIDAHRENNPYYDYLETE---------------DLVKNPYVKASDWDWQIDPQGLRYALNWFTDMYHLPLFIVENGFGAIDQVEADGMVHDDYRIDYLGAHIKEMIKAVDEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKEVIASNGDDI


General information:
TITO was launched using:
RESULT:

Template: 3PN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2715 -241434 -88.93 -534.14
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -88.93
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_3PN8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PN8-query.scw
PDB file : Tito_Scwrl_3PN8.pdb: