Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTMKQFEIAAIPGDGVGKEVVAAAEKVLHTAAEVHGGLSFSFTAFPWSCDYYLEHGKMMPEDGIHTLTQFEAVFLGAVGNP-KLVPDHISLWGLLLKIRRELELSINMRPAKQMAGITSPLLHPNDFDFVVIRENSEGEYSEVGGRIHRGDDEIAIQNAVFTRKATERVMRFAFELAKKR-RSHVTSATKSNGIYHAMPFWDEVFQQTAADYSGIETSSQHIDALAAFFVTRPETFDVIVASNLFGDILTDISSSLMGSIGIAPSANINPSGKYPSMFEPVHGSAPDIAGQGLANPIGQIWTAKLMLDHFGEEELGAKILDVMEQVTADGIKTRDIGGQSTTAEVTDEICSRLRKL
3AH3 Chain:A ((3-334))-----YRICLIEGDGIGYEVIPAARRVLEAT-----GLPLEFVEAEAGWETFERRGTSVPEETVVKILSCHATLFGAATIPTRKVP---GFFGAIMALRRRLDLYANVRPAKSR---PVPGSRPG-VDLVIVRENTEGLYVEQERRYL----DVAIADAVISKKASERIGRAALRIAEGRPRKTLHIAHKANVLPLTQGLFLDTVKEVAKDFPLVNVQDIIVDNCATQLVMRPERYDVIVTTNLLGDILSDLAAGLMGGLGLAPSGNI---GDTTAVFEPVHGSAPDIAGKGIANPTAAILSAAMMLDYLGEKEAAKRVEKAVDLVLERGPMTPDLGGDATTEAFTEAVVEALKSL


General information:
TITO was launched using:
RESULT:

Template: 3AH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1854 -184231 -99.37 -558.28
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -99.37
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_3AH3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AH3-query.scw
PDB file : Tito_Scwrl_3AH3.pdb: