Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKQIIYPGAVIGIIGGGQLGKMMAVSAKQMGYKVAVVDPVKDSPCGQ-----VADVEITAHYNDREAIRKLAEISDIITYEFENIDYDALHWLKDHAYLPQGSELLLITQNRETEKKAIQSAGCEVAPYSIVKTKNELKQAVQELRLPAVLKTCRGGYDGKGQFVIKEEAQMEQAAALLEHGT--CILESWVSFKMELSVIVVRSVNGEISTFPTAENIHHNNILFQSIVPARVEKGIQQKAADLAVKLADELNLVGPLAVEMFLTEDGELLVNELAPRPHNSGHYTLDLCETSQFEQHIRAVCGLPLGKTDLLKPGMMVNLLGDEVKLVEEDPELLKEAKLYIYGKHEIKKGRKMGHITF-MKQPEDEWIQEITNKWMNRDGGQAE
4MA5 Chain:A ((3-350))-----------IGIIGAGQLARMLSLAGTPLGLEFHCLG--KNGDCAEEVVKTVTDIELT-KVND---VVAWAKQFDVITFENENISHELIKAINHEVSVYPSAKAIAISQDRLLEKSFMQDHGIATAKFVNIDSLAKLQSAVDDHGLPAILKTRRFGYDGKGQFVIRSQEDITKAWDVLKDAPDGLIYEAFVDFDYEVSQICTADLKGNIAFYPLARNTHKQGIIVESEAPFE-NVVLAEKAQQIAKILVKEFAYVGTLAIEFFVK---ELIVNEIAPRVHNSGHWSIDGAVTSQFENHVRAIAGLILGDTTSRKT-VMLNCIGGMP--ATKDLAALDRVKIHSYNK-EPRKGRKVGHLNLNLNDETDEY-----------------


General information:
TITO was launched using:
RESULT:

Template: 4MA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1888 -186365 -98.71 -551.38
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -98.71
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_4MA5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MA5-query.scw
PDB file : Tito_Scwrl_4MA5.pdb: