Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNSFLGLLKKDIKLSRMWLLVWICGIIFLLGTGHIIASRTKEPLVIFGFFVAVAFFLLFLSPVFVFYHLRKEGKSQLWLYNPNGG--LWLFSSKLAASLLYQFVIQLALTAYGIWMYHMLSVKNLLEHQVDITSTVALLNMYGLISSLDMSVTVIVFWTVFHSLRNWRGMRWAAMVLLVAMWLFFDEYIISPLVESQKHFWPVTVYCNFDFHFHNVWRLELKPIHLSVLGFPIAIVITFLLLIMASKLLDRKVEV
4M5B Chain:A ((1-214))----MHIPEGYLSPQTCAVMGAAMVPVLTVAAKKVNKSFDKKDVPAMAIGSAFAFTIMMFN------------------VPIPGGTTAHAIGATLLATTLGPWAASISLTLALFIQALLFGDGGILALGANSFNMAFIAPFVGYGIYRLMLSL--------KLNKVLSSAIGGYVGINAAALATAIELGLQPLLFHTANGTPL--YFPYG---LNVAIPAMMFAHLTVAGIVEAVITGLVVYYLLEHHH------


General information:
TITO was launched using:
RESULT:

Template: 4M5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1125 -180106 -160.09 -849.55
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -160.09
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.201

(partial model without unconserved sides chains):
PDB file : Tito_4M5B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M5B-query.scw
PDB file : Tito_Scwrl_4M5B.pdb: