Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTLLEVNNLKTYFFRKKEPIPAVDGVDFHISKGETVALVGESGSGKSITSLSIMGLVQSSGGKIMDGSIKLEDKDLTSFTENDYCKIRGNEVSMIFQEPMTSLNPVLTIGEQITEVLIYHKNMKKKEARQRAVELLQMVGFSRAEQIMKEYPHRLSGGMRQRVMIAIALSCNPKLLIADEPTTALDVTIQAQVLELMKDLCQKFNTSILLITHDLGVVSEAADRVIVMYCGQVVENATVDDLFLEPLHPYTEGLLTSIPVIDGEIDKLNAIKGSVPTPDNLPPGCRFAPRCPKAMDKCWTNQPSLLTHKSGRTVRCFLYEEEGAEQS
3TUJ Chain:C ((2-248))----IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKS-TLIRCVNLLE----RPTEGSVLVDGQELTTLSESELTKAR-RQIGMIFQH-FNLLSSRTVFGN--VALPLELDNTPKDEVKRRVTELLSLVGLGDKHD---SYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLD-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3TUJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1237 -182273 -147.35 -737.95
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain C : 0.76

3D Compatibility (PKB) : -147.35
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_3TUJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TUJ-query.scw
PDB file : Tito_Scwrl_3TUJ.pdb: