Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALKAQNTISGKEGRLFLDGE-EMAHIKTFEANVEKNKSEVNIMGRRMTGHKTTGANGTGTATFYKVTSKFVLLMMDYVKKGSD-PYFTLQAVLDDQSSGRGTERVTLYDVNFDSAKIASLDVDSEALEEEVPFTFEDFDVPEKLSDTF
3EAA Chain:A ((11-133))----------KVDGESTDDKHKKWIEVLGFAWGAGNECTME-----SGTQGLNTGKAMMSVLRVTKWMDCASVKLASAAVQGQNFPTLELEICTQA-GDKFAFCIYKFTHVAVSSYQCSGATGGSDRPQETIDFAYKEV----------


General information:
TITO was launched using:
RESULT:

Template: 3EAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 430 -27969 -65.04 -231.14
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -65.04
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_3EAA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EAA-query.scw
PDB file : Tito_Scwrl_3EAA.pdb: