Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTSKSEKVMVQLDEVDQNDLVAIYENE
2IGB Chain:A ((2-179))--QKAVVMDEQAIRRALTRIAHEIIERNKGIDGCVLVGIKTRGIYLARRLAERIEQIEGASVPVGELDITLYR-------DDHEPLVKGTNVPFPVTERNVILVDDVLFTGRTVRAAMDAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVPTSRSELIVVELSEVDGIDQVSIHEK-


General information:
TITO was launched using:
RESULT:

Template: 2IGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 892 -129167 -144.81 -755.36
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.94

3D Compatibility (PKB) : -144.81
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.94
QMean score : 0.649

(partial model without unconserved sides chains):
PDB file : Tito_2IGB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IGB-query.scw
PDB file : Tito_Scwrl_2IGB.pdb: